YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27261729
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIYRGLSRI SRISKKTPFG RRWLPSHPLL SGASHSAAAA AADSSVKVLG CREAYSWSLP  60
   61 ALHGIRHQIH HQSSSVIEDT DSQEQLDPFS LVADELSILA KRLRSMVVAE VPKLASAAEY 120
  121 FFKMGVEGKR FRPTVLLLMA TALNVRVPEP LHDGVEDALA TELRTRQQCI AEITEMIHVA 180
  181 SLLHDDVLDD ADTRRGIGSL NFVMGNKLAV LAGDFLLSRA CVALASLKNT EVVTLLATVV 240
  241 EHLVTGETMQ MTTSSDQRCS MDYYMQKTYY KTASLISNSC KAIALLAGQT AEVAILAFDY 300
  301 GKNLGLAYQL IDDVLDFTGT SASLGKGSLS DIQHGIITAP ILFAMEEFPQ LRTVVEQGFE 360
  361 DSSNVDIALE YLGKSRGIQK TRELAVKHAN LAAAAIDSLP ENNDEDVRKS RRALLDLTHR 420
  421 VITRNK

Type	Start	End	Confidence
Signal Peptide	1	41	0.98
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	426	0.99