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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1620451
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLRFDGRV GLVTGAGGGL GRAYGLAFAE RGALVVVNDL GGDFKGVGKG SSAADKVVEE  60
   61 IRRRGGKAVA NYDSVEAGEK LVKTALDTFG RIDVVVNNAG ILRDPSFSRI SDEDWDIIQR 120
  121 VHLRGSFQVT RAAWDHMKKQ NYGRIIMTAS ASGIYGNFGQ ANYSAAKLGL LGLANTLVIE 180
  181 GRKNNIHCNT IAPNAGSRMT ETVMPEDLVE ALKPEYVAPL VLWLCHESCE ENGGLFEVGA 240
  241 GWIGKLRWER TLGAIVRKRN QPMTPEAVRD NWVKICDFSN ASEPKSIQES TGGIIEVLHK 300
  301 IDSEGISQNH TGQVASADAS GFAGVVGHKL PSFSSSYTEL QCIMYALGVG ASVKNPKDLK 360
  361 FVYEGSPDFS CLPTIGVIVA QKSLMSGGLA EVPGLSINFA KVLHGEQYLE LYKPLPRSGE 420
  421 LKCEAVIADI LDKGSGIVIV MDVYSYSGKE LICYNQFSVF VVGSGGFGGK RTSEKLKAAV 480
  481 AVPSRPPDAV LRDTTSVNQA ALYRLSGDSN PLHIDPSFAG IAGFEKPILH GLCTFGFSAR 540
  541 HVLQQFADND VSRFKAIKVR FAKPVYPGQT LQTEMWKEGN RIHFQTKVQE TGDIVISNAY 600
  601 VDLVPTSGVS AQTPSEGGAL QSALVFGEIG RRLKDVGREV VKKVNAVFEW HITKNGNVAA 660
  661 KWTIDLKNGS GEVYQGPAKG SADTTITISD EDFMEVVLGK LNPQNAFFSG RLKARGNIML 720
  721 SQKLQMILKD YAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle