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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32526671
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGGGGVVV VRAVLLLLAA VAAAEALSLD VHHRYSAAVR RWAAAAAPPH GTAEYYAALA  60
   61 GHDGLRRRSL GVGGGGGGAE FAFADGNDTY RLNDFGFLHY AVVALGTPNV TFLVALDTGS 120
  121 DLFWVPCDCL KCAPFQSPNY GSLKFDVYSP AQSTTSRKVP CSSNLCDLQN ACRSKSNSCP 180
  181 YSIQYLSDNT SSSGVLVEDV LYLTSDSAQS KIVTAPIMFG CGQVQTGSFL GSAAPNGLLG 240
  241 LGMDSKSVPS LLASKGLAAN SFSMCFGDDG HGRINFGDTG SSDQKETPLN VYKQNPYYNI 300
  301 TITGITVGSK SISTEFSAIV DSGTSFTALS DPMYTQITSS FDAQIRSSRN MLDSSMPFEF 360
  361 CYSVSANGIV HPNVSLTAKG GSIFPVNDPI ITITDNAFNP VGYCLAIMKS EGVNLIGENF 420
  421 MSGLKVVFDR ERMVLGWKNF NCYNFDESSR LPVNPSPSAV PSKPGLGPSS YTPEAAKGAL 480
  481 PNGTQLRRGG MDRYQRVEKP REEAPIKENE IRITTQGRMR NYITYATTLL QDKGSDEVVF 540
  541 KAMGRAINKT VMIAELIKRR IVGLHQNTTT GSTDITDMWE PLEEGLLPLE TTRHVSMITI 600
  601 TLSKKELDTS SIGYQSPLPA DKVKPLVEYE NEEDAPSPAG RGRGRGGQGR GRGRGRGTRG 660
  661 NGYMDYADGG WEDDHAPPAY AGNGYTRGRG RGFRGRGRRG GGYGAQPDYQ QDGGYYDEAP 720
  721 VHAPPRGGYM IC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle