YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32490453, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGPSIQDRT GEFHAILGQA QKRVATNKVG SQRQALLSDS QRRQANGSAN GGAQPGRRSE  60
   61 FARRAVEIGR GITATTAKLQ RLAELAKRKT LFDDKPVEIS ELTYVIKQDL ASLNQQIASL 120
  121 QALTLSQHPK SNRSKADQEG EHNDNVVVML QGKLADVGAN FKEVLEVRTK NIQASRSRTE 180
  181 NFVSSVSSKS QAALDTQRSD SPLYTSGRRT PQPGGSSDLL TLEPSNPSPL GRPSMHSDQQ 240
  241 LLVMEEAQTS NSYIQARGEA IDAIERTINE LGGIFGQLAQ MVSEQSEMIQ RIDANTEDVV 300
  301 DNVQGAQREL MKYWTRVSGN RWLIAKMFGV LMIFFLLWVL ISG

Type	Start	End	Confidence
Cytoplasmic	1	321	0.88
Transmembrane Helix	322	341	0.97
Non-Cytoplasmic	342	343	0.73