YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9828138, gi\|9...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGLRFETQLK TLCQFPETLL GDPKRRMRYF DPLRNEYFFD RNRPSFDAIL YYYQSGGRIR  60
   61 RPVNVPIDIF SEEIRFYQLG EEAMEKFRED EGFLREEERP LPRRDFQRQV WLLFEYPESS 120
  121 GPARGIAIVS VLVILISIVI FCLETLPEFR DEKDYPASP

Type	Start	End	Confidence
Cytoplasmic	1	122	0.56
Transmembrane Helix	123	143	0.87
Non-Cytoplasmic	144	159	0.55