YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18496856
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSKNVVVV EAWNTTTTTQ TQTPHRPSLL HPTFYWGYNC QVLFSGWPGS DRGMYALALI  60
   61 FVFFLAFLAE WLARCSDASS IKQGADKLAK VAFRTAMYTV KSGFSYLVIL TVVSFNGGVF 120
  121 LAAIFGHALG FAVFRGRAFR NRDIQ

Type	Start	End	Confidence
Cytoplasmic	1	52	0.47
Transmembrane Helix	53	73	0.93
Non-Cytoplasmic	74	102	0.41
Transmembrane Helix	103	134	0.78
Cytoplasmic	135	145	0.64