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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCB3_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDGNENNEN AQHDEYDEEE IEIPIDEIII EEVDDDHLLE GEGEFQIITQ PSNNNNNSNN  60
   61 NNFGDIYVSN PNTPRNNNNN NNNNNNNNNN NNNNNNNNSN NSFNNNKKNE VSIGISENTN 120
  121 ENNNKNNNNN NNNNDDYNDG ADERVKTEEE IKKEAENELN QSVPFLSLFR FADNTDKVLM 180
  181 FLGTIAAVIN GAAMPTVSLV FGLVVDAFKP TQFNDDPNYD IYDTVRSISF YLLMLGGGVF 240
  241 VLSYLETTLW MIAGERQTSR IRREYLESTL RQEIGWFDTN KANELSSRIN SDTVLFEEAI 300
  301 GEKVGRFIHF FSTFVAGFVI GFTKGWQLTL VITSVSPLLA IGGFFTAKMM TQMTKLGQEA 360
  361 YSRAGGVAEE NIGSIRTVAT FSGEKLAIDK YSNNLKDART VGYKRSFFNG LGLGFVQFVI 420
  421 LGTYALAFWY GSTLISNKVT NSVSDRPWTG GDVVSVFFAV IIGATSIGQA SPCLALFAQG 480
  481 RGAAYKIFQV IDRQSKANPF STRGIKPETL SGEIEFKDVG FHYPSRPDVP IFNGFNLKIK 540
  541 PGQTVGLVGD SGGGKSTIIS LLERFYDPCQ GEILLDGEDI RKFNVRGLRQ KIGLVNQEPV 600
  601 LFATTISENI RYGKEGATQD EIEEAAKLAN AHSFISQLPQ GYNTLVGEKG VQMSGGQRQR 660
  661 IAIARAVIKN PNILLLDEST SALDAESTKL VQEALDVLMK GRTTIVIAHN LSTIRNADVI 720
  721 IYIKKGVAVE RGTHDELMAK QGLYFDLVEK QSHQQMYNLL ENGTRSRRSS TFSAEVNPLL 780
  781 DSFHVSKRSL RKNESESNKK DKEDSNNKKK KKSNKKKVEE VPMSRVVKYN RPELGLWCFG 840
  841 FLSAVGTGAV YPGFAMVFTE MLTIFQNPDP NYLTDHANFV ALMFVALAVG AGISNFFQGF 900
  901 LFSVIGEKLT YRLRRDCFAA IMRQDVGWFD LPENSTGKLT SHLATDAALV QGMTSQRLGI 960
  961 VLQNILTMVG GLVIAFYSGW QLTLVIIACF PLVVITSKVQ MQILAGFSSK DGCGPAGQVA1020
 1021 SEAISGIRTV ASFTTEKQVV ELYKKQQKGP SSEGIKKAHI SGFAFGFTQL ILFCVYCLSF1080
 1081 WYGGKLVGSG VFGATDKEIS DNCTPQTIPY LWKDYDTCER AQNTIYGFNS MTRVFFAIVM1140
 1141 SAIGVGQASS FAPDLAKAKA AAVSVFKLLD TPSKIDPTTE DGDRIDIVGG DIEFKNLHFS1200
 1201 YPTRPDNSVF RGFTLTLQSG TTTALVGDSG GGKSTCLSLL QRFYNPVVGE IFIDGHNIKN1260
 1261 LNVRHLRHLF GLVGQEPTLF SGTIADNIRY GKHDATQEEI EEASKLSNSH SFIIDLPNGY1320
 1321 NTELGEKYTQ LSGGQKQRIA IARAIIRNPK ILLLDESTSA LDADSTKLVQ EALENVMKGR1380
 1381 TTIVIAHNLL TIQNADCIAY VRAGQIIERG THDELLEAEG PYSQLWYNQQ QK

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