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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ODP24_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSSSSFLS TASLTNSKSN ISFASSVSPS LRSVVFRSTT PATSHRRSMT VRSKIREIFM  60
   61 PALSSTMTEG KIVSWIKTEG EKLAKGESVV VVESDKADMD VETFYDGYLA AIVVGEGETA 120
  121 PVGAAIGLLA ETEAEIEEAK SKAASKSSSS VAEAVVPSPP PVTSSPAPAI AQPAPVTAVS 180
  181 DGPRKTVATP YAKKLAKQHK VDIESVAGTG PFGRITASDV ETAAGIAPSK SSIAPPPPPP 240
  241 PPVTAKATTT NLPPLLPDSS IVPFTAMQSA VSKNMIESLS VPTFRVGYPV NTDALDALYE 300
  301 KVKPKGVTMT ALLAKAAGMA LAQHPVVNAS CKDGKSFSYN SSINIAVAVA INGGLITPVL 360
  361 QDADKLDLYL LSQKWKELVG KARSKQLQPH EYNSGTFTLS NLGMFGVDRF DAILPPGQGA 420
  421 IMAVGASKPT VVADKDGFFS VKNTMLVNVT ADHRIVYGAD LAAFLQTFAK IIENPDSLTL 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle