YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18447479
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPMICDLWS GRIWLLILIC LCGFQQSRCF FVDYTENTEL IQQRAGFDVK LQCNLKGLVD  60
   61 ESMLNDIKIH WYFKQCSENN CHQLGSVDEW TALPCEPSLC RPELWLRNVT ERYSGLYKCS 120
  121 INPHIWDKAQ AVDVQLVRTY QLDVKNTSLA APEFVDSYPN NKTTLVGSRV VFQCRVHSEE 180
  181 HPTIKWFRRQ TYVGTQSVAK PPRHPQPQIL ATILSGTMVE HMNYCPPIQK R

Type	Start	End	Confidence
Signal Peptide	1	29	0.70
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	231	0.97