YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18447100
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYSTVRNPS IALIKQGYHI LAEYNLVKDE LKNIYAIPSY ACGLHWFGVI FVHSGIYAGS  60
   61 VFRFSILLPD NFPADISLPT VVFSTEVLHP HICPQNKTLD LAHFLNEWRK DEHHIWHVLR 120
  121 YIQAIFADPE GSICTGQSSS GDLVIMDEVR NMDALNMLAK SRPEYIKRVQ EQAILSRKLI 180
  181 YDRPPTEDPH YIIVEPYCAE RHLKFMDQLK SPCWKEATSM DCSQPSEYLG HIDSSRQLDE 240
  241 EEANQVEKLH RGRIPEHQRE ESEVSL

Type	Start	End	Confidence
Cytoplasmic	1	41	0.64
Transmembrane Helix	42	59	0.72
Non-Cytoplasmic	60	266	0.89