YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18446873
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLYLLGWV SLAIQIVFLT LSIVAGLYYL AELAEEYTSA ARKCILFLIS FTIFVYILLL  60
   61 LFEDLPWSLI ICGLVAQGFH LGIMSGFPFV RLLSLPLLGS LAMLVVNHFL AFQHFVTVYV 120
  121 PFTQVLAYFT ICMWIVPFAL FVSLSANDSV LPTTVSDQSR RSPDVVSNYF SRNKKQGLLS 180
  181 LFQYLKEALL PGRTKKAF

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.86
Transmembrane Helix	8	31	0.90
Cytoplasmic	32	39	0.89
Transmembrane Helix	40	60	0.90
Non-Cytoplasmic	61	66	0.70
Transmembrane Helix	67	87	0.83
Cytoplasmic	88	91	0.63
Transmembrane Helix	92	112	0.86
Non-Cytoplasmic	113	124	0.60
Transmembrane Helix	125	144	0.91
Cytoplasmic	145	198	0.86