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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7804919
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSPKHSLLA LLVGGLCSTS ALAAAPGKPT IGWGETKFAI IQVDQAATSY NKLVTVHKDG  60
   61 APVSVTWNLW SGDVGQTAKV LLDGKEVWSG AASAAGTANF KVTKGGRYQM QVALCNADGC 120
  121 TLSDKKEIVV ADTDGSHLAP LNAPLQENNK PYTNKAGKVV GAYYVEWGVY GRKFTVDKIP 180
  181 AKNLTHILYG FTPICGGNGI NDSLKEISGS FEALQRSCAG REDFKVSIHD PWAAVQMGQG 240
  241 NLTAFDEPYK GNFGNLMALK KANPNLKILP SVGGWTLSDP FYFFSDKTKR DTFVASMKEY 300
  301 LQTWKFFDGV DIDWEFPGGQ GANPNLGGPN DGATYVALMK ELRAMLDELE AETGRQYELT 360
  361 SAISAGGDKI AKVDYQAAQQ YMDYIFLMSY DFSGAFDLKN LAHQTNLYAS SWDPATKYTT 420
  421 DKGVKALLGQ GVTPGKVVVG AAMYGRGWTG VNGYQAGNPF TGSATGPIKG TWENGVVDYR 480
  481 DIVNNRMGAG WEQGYDETAE APYVFKASTG DLISFDNDRS VKAKGQYVLA NQLGGLFAWE 540
  541 IDADNGDILN AMHEGLGNGD GGTTPPVNKP PVANAGSDLS VTGPAEVTLN GAASHDPESG 600
  601 VLSYSWKQVS GPQVSLLDAT QAKARVVLDA VSADINLVFE LTVTDDHNLT AKDQVVVTNK 660
  661 APQPNLPPVV TVPATASVES GKQVTIKATA SDPNGDALTY QWSLPAGLTA TGQNSATLVV 720
  721 TGPSVTSDTA YDLSLVVTDG SLDASAGTRL TVKPASTGGG CEATDPDAAN HPAWSASAVY 780
  781 NTNAKVSHKQ LVWQAKYWTQ GNEPSQTADQ WKLLSAVQLG WNAGVAYNAG DLTNHNGRKW 840
  841 KAQYWTKGDE PGKAAVWVDQ GAASCN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle