YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRL_AILME
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKKGWSLKG SLLPLLLLVS DLLLCQSVAS LPICPTGAVN CQVSLRDLFD RAVILSHYIH  60
   61 NLSSEMFNEF DKRYAQGRGF ITKAINSCHT SSLSTPEDKE QAQQIHHEDL LNLILRVLRS 120
  121 WNDPLYHLVT EVRGMQEAPD SILSRAIEIE EQNRRLLEGM EKIVGQVHPG VRENEVYSVW 180
  181 SGLPSLQMAD EDTRLFAFYN LLHCLRRDSH KIDNYLKLLK CRIVYDSNC

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	229	0.99