YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6176510
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPSPAPTLR RYKTVKEVQL FDGNLVLDCP IPPKLLNQIP HAQPPERDEF THMRYTAATC  60
   61 DPGDFYAERF TLRQKLFAKP RHTELFIVVT MYNEDDILFA RTMSGVFKNI EYMCSRKDSK 120
  121 TWGKDAWKKI VVCVVSDGRA KINPRTRAVL AGLGVYQDGI AKQQVNGKDV TAHIYEYTTQ 180
  181 VGITIKKDLV ELRPKQQPVQ MLFCLKEKNQ KKINSHRWFF QAFGKVLDPN ICVLIDAGTK 240
  241 PGKDSIYHLW KAFDLEPMCA GACGEIKAML GPGGKNLLNP LVATQNFEYK ISNILDKPLE 300
  301 SAFGFISVLP GAFSAYRYVA LQNDKAGNGP LEKYFAGEKM HGSNAGIFTA NMYLAEDRIL 360
  361 CFELVSKRDC HWILQYVKSA TGETDVPDQM AELILQRRRW LNGSFFAAVY ALAHFYQLFR 420
  421 SDHSFIRKIM FLIEFIYTTI NMIFAWFAIG NFYLVFHILT TSLGSPTLLG TLGVFLGVVF 480
  481 EWLYLFTLLT CFVLALGNRP QGSNVAYISM VLFWGVLMCY LMFASVFITV KSIQSELADG 540
  541 IFNVAEILKN QVFYTLVVSL ASTYVLWFVV SFLFFDPWHM FTSFIQYLIL VPTYINVLNV 600
  601 YAFCNTHDIT WGTKGDDKAE KLPSANLKPG GKIDVNIPTD DGDLNAQYEA ELNHISHKAP 660
  661 EEKREVSMSE KQDDYYRGFR SRVVLFWIIC NFGLVAVVLS TAGLSRISGT KGPIDNPASS 720
  721 PVDQRATIYM AVVLWSVAGL SAFKFVGAMW FLIVRMFRGV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle