YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18140913
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLFVACLFG IWALASPQRY VVEDICTAKP RDIPVNPICI YRNPEKKLQE GEGQETGKGK  60
   61 IPGFTNPRVW ELSRANSRFA VVFYKYLADS KDNGENIFMS PLSISTAFAM TKLGACGDTL 120
  121 QQLMEVFRFD TISEKTSDQI HFFFAKLNCR LYKKANKSSE LVSANRLFGE KSLVFNETYQ 180
  181 NISEIVYGAK LWPLNFKEKP ELSRKTINEW VANKTEGRIT EVIPEGGIDD LTVLVLVNTI 240
  241 YFKGHWKSQF PAPNTKLDLF YKANGETCRV PVMYQESKFR HASIRQDKVQ VLELPYKGDD 300
  301 ITMVLVLPDA ETPLVEVERD LTSEKLQGWI DSLTEVSLVV YLPRFRIEDS FSVKEKLRKM 360
  361 GLEDLFSPEN ARLPGIIAEG RTDLYVSDAF HKAFLEVNEE GSEASAATAV VISGRSFPMN 420
  421 RMSFNANRPF LLFIREAALN TIIFMGRIAD PCS

Type	Start	End	Confidence
Signal Peptide	1	17	0.94
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	453	0.99