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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNAG_07004T0, CN...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARQPLSQN LLRPLSRPSS SFCRTSTIPK LAFLQSARGF ASASEPYDVV IIGGGPGGYV  60
   61 AAIKAAQLGF KTACIEKRGA LGGTCLNVGC IPSKAMLNNS HIFHQTQHDL KNRGIDVSDI 120
  121 QLNLPKMLAA KEASVKALTG GIETYLFKKN GIDYIKGEAS FETANKLSVK LLEGGETQVE 180
  181 AKNVIIATGS EVTPFPGLEI DEERIVSSTG ALELKEVPKK MVVIGGGVIG LELGSVWSRL 240
  241 GAEVTVVEYL GAIGAGMDGE VGKQFQKILT KQGFKFKLNT KVVSGHREGD IVKLKVDSAK 300
  301 GGREETIEAD VVLVAIGRRP VTTGLNLEAI GVETDKRGRI IIDDEFNTSA KGVKCIGDVT 360
  361 FGPMLAHKAE EEGIAAVEIL KTGHGHVNYD AIPSVVYTHP EVAWVGKNEE ELKAAGVQYK 420
  421 IGKFPFAANS RAKTNQDSEG FVKFIVEKET DQVLGCHIIG PNAGEMIASA TLALEYKASA 480
  481 EDIARTCHAH PTLSEAFKEA ALASYDKTIN F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle