YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14596171, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS  60
   61 LALIAAFAPP SMAEAMEKAQ LFDFNLTLPI IVVEFLFLMF ALDKVYYSQL GNFMDQRDAS 120
  121 IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE 180
  181 EELKEALASL ESQKEETIKA LDSQIAALSE DIVKKVLPS

Type	Start	End	Confidence
Signal Peptide	1	73	0.44
N-region	1	64
H-region	65	70
C-region	71	73
Cleavage Site	73	74
Non-Cytoplasmic	74	219	0.69