YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31580851
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGISLEEIK NENVDLERIP VEEVFEQLKC SRAGLSSDEG ASRLQVFGPN KLEEKKESKF  60
   61 LKFLGFMWNP LSWVMEAAAI MAIALANGGG RPPDWQDFVG IIALLVINST ISFIEENNAG 120
  121 NAAAALMAGL APKTKVLRDG RWTEQDAAIL VPGDIISIKL GDIIPADARL LEGDAFECDQ 180
  181 SALTGESLQV TKNPSDEVFS GSTVKKGEIE AVVIATGVHT FFGKAAHLVT APIKLGTFRK 240
  241 FSQQLVNFCI CSIAVGIVIE LIVMYPIQHR KYRDGIDNLL VLLIGGIPIA MPTVLSVTMA 300
  301 IGSHRLSQQG AITKRMTAIE EMAGMDVLCS DKTGTLTLNK LTVDKNLIEV FAKGVEKEYV 360
  361 ILLAARASRT ENQDAIDAAI VGMLADPKEA RAGIREVHFL PFNPVDKRTA LTYIDSDGNW 420
  421 HRSSKGAPEQ ILNLCNCKED VRKRVHTAID KFAERGLRSL GVARQEVPEK NKDSPGAPWQ 480
  481 FVALLPLFDP PRHDSAETIT RALNLGVNVK MITGDQLAIA KETGRRLGMG TNMYPSSSLL 540
  541 GQSKDASVSA LPVDELIEKA DGFAGVFPEH KYEIVKRLQE RKHICGMTGD GVNDAPALKK 600
  601 ADIGIAVADA TDAARSASDI VLTEPGLSVI ISAVLTSRAI FQRMKNYTIY AVSITIRIVF 660
  661 GFMFIALIWK FDFAPFMVLI IAILNDGTIM TISKDRVKPS PQPDSWKLRE IFATGVVLGS 720
  721 YMALMTVVFF WLMKDTDFFS DKFGVRSLRN SPEEMMAALY LQVSIISQAL IFVTRSRSWS 780
  781 YVERPGLLLL GAFFIAQLVA TFLAVYANWG FARIKGMGWG WAAVIWLYSL VTYVPLDILK 840
  841 FTIRYVLSGK AWDNLLENKT AFTTKKDYGK EEREAQWATA QRTLHGLQPP ETTSIFNDKN 900
  901 SYRELSEIAE QAKRRAEVAR LRELHTLKGH VESVVKLKGL DIDTIQQHYT V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle