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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215713584, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGGKGWVE RARRGVKTAW FMVAMVASLL MASAPALVAA GDVAVALWLE VRLGCLRCHG  60
   61 LRGHLERYGF RSSLVDIPLV SIARSVVITC VYLMSDASGL SHGPYLGTAT CCSLASLLIL 120
  121 LIKASVYSPA QEIGPELSPS LADHKLSLKK LSGMPVLFLS SLVFALGHVV VAYRTSCRAR 180
  181 RKLLIHGIDP ESILAYKNAY PGCYKTPRSP TPYSGKFYSR SDSETKRKSV AHDDRDIPIS 240
  241 FLADGDSMFI ACQGITVHYK LSDPSSCISS ATDTFPEIHH DVISASISPR RQRHDSPPSA 300
  301 STNTRRLLNR SFSHQYHQTS LYAPLLVEPV TSPTLSDDTP VLSVDDGSAD VCLKPMGFDL 360
  361 EAGEQGKFAV VLVHGFGGGV FSWRHVTNLL SRQVGCTVLA FDRPGWGLTS RPRRKDWEDK 420
  421 NLPNPYELGS QVDLLISFCS DMGLRSVVLV GHDDGGLLAL KAAEKLRASG DSRKVEVKGV 480
  481 VLIGVSLSRE VIPAFARILL HTPLRKKHMV RPLLRTEITQ VINRRAWFDA TKLTTDVLNL 540
  541 YKAPLFVEGW DEALHEVGRL SFSTVLSSKR AADLLRSVED LPVLVVAGSE DALVSSKSTQ 600
  601 VMASRLVNSR LVTISNCGHL PHEECPKALL SALSPFISGL VSSDDSLQRL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle