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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|61806606, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTWIVLLLW ACAHISVNAI ALSRGPVRRK SKEIEGRQDK GLLRRSKRGW MWKQFFLQEE  60
   61 YTGSEHQYIG KLHSDMDRGD GTVMYVLTGE GAGTIFVIDA NSGDLHATRS LDREEKPSYS 120
  121 LRAQAVNRKT GIPLEPETEF IVKLHDINDN EPKFDKEVYT ASVPEGSHIG TFVTQVTAQD 180
  181 ADDEMFGYSA KLAYSIKEGH PYFSVEPNTG IIRTALGPTD MDREQREHYQ VVIEAKDMAG 240
  241 QKGGLIGSTT VNISLTDIND NAPHFKQGIY QFSVPELTKV GSSVGRIEAE DADIGRNAEM 300
  301 SYSITGGDSL DVFDISTDRN TQEGILTVKK PLDYEKKKSY TLQIEVKNTH PYSHYMSQDT 360
  361 KDKATIRISV EDVDEPPQFE KISYILEVKE DAAVGTMIGS VSAVDPDMRR SPVKYSIDRH 420
  421 TDVDRIFGIY AGNGSIFLQK PLDREEFAWH NISVIASEFR HLDNPEQTSR VPVYIRVLDV 480
  481 NDNPPVLASF YETFVCENAK AGQKIQTISA VDPDEPVGGH RFLFSLAPES SVRANFSVRD 540
  541 NGDNTAGIFT RRSGFGRMHK STHLVAVVIS DGHFPMQSST GTLTIRVCTC DRDGNMEMCN 600
  601 AEALTSSAGL STGALVAILL CILILLLIVV LFAALKRQKK KEPLIISKED VRDNVVSYND 660
  661 EGGGEEDTQA FDIGALRHPE VMEDSKLRRD ILPSESLYPP PPLRRTIVPA RENADVRDFI 720
  721 NQRVEENDGN PTAPPYDSLA TYAYEGNGSV AESLSSLGSV SSEGEQDYNY LSEWGPRFRK 780
  781 LADMYGGEDS DWDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle