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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46430475
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSLEEIKN ETVDLEKIPI EEVFEQLKCT REGLSADEGA NRLQIFGPNK LEEKKESKLL  60
   61 KFLGFMWNPL SWVMEAAAIM AIALANGNGK PPDWQDFVGI ICLLVINSTI SFIEENNAGN 120
  121 AAAALMAGLA PKTKVLRDGR WSEQDAAILV PGDIISIKLG DIVPADARLL EGDPLKIDQS 180
  181 ALTGESLPVT RNPYDEVFSG STCKQGEIEA VVIATGVHTF FGKAAHLVDS TNQVGHFQKV 240
  241 LTAIGNFCIC SIAVGMLVEL VVMYPIQHRK YRDGIDNLLV LLIGGIPIAM PTVLSVTMAI 300
  301 GSHRLSQQGA ITKRMTAIEE MAGMDVLCSD KTGTLTLNKL SVDKNLIEVF AKGFDKEHVL 360
  361 LCAARASRTE NQDAIDAAIV GTLADPKEAR AGIREVHFLP FNPVDKRTAL TYIDSDGNWH 420
  421 RTSKGAPEQI LTLCNCKEDL KKKVHAMIDK FAERGLRSLG VASQVVPEKS KDSAGGPWQF 480
  481 VGLLSLFDPP RHDSAETIRR ALNLGVNVKM ITGDQLAIAK ETGRRLGMGT NMYPSASLLG 540
  541 QDKDASIASL PVEELIEKAD GFAGVFPEHK YEIVKKLQER KHICGMTGDG VNDAPALKKA 600
  601 DIGIAVADAT DAARSASDIV LTEPGLSVII SAVLTSRAIF QRMKNYTIYA VSITIRIVFG 660
  661 FMFIALIWKF DFSPFMVLII AILNDGTIMT ISKDRVKPSP LPDSWKLKEI FATGIVLGGY 720
  721 LALLTVIFFW LMKDTDWLPN TFGVRSIRNK PDEMMAALYL QVSIVSQALI FVTRSRSWSF 780
  781 VERPGFLLLG AFLIAQLIAT LIAVYANWGF ARIQGCGWGW AGVIWLYSIV FYFPLDIMKF 840
  841 ATRYALSNKA WQSMIDNRTA FTTKKDYGKE EREAQWALAQ RTLHGLQPPE ASNIFNEKSS 900
  901 YRELSEIAEQ AKRRAEVARL RELHTLKGHV ESVVKLKGLD IDTIQQHYTV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle