YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7689365
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GADTSELESG GLLQEIFTSP LNLLLLGLCI FLLYKIVRGD QPAASDSDDD EPPPLPRLKR  60
   61 RDFTPAELRR FDGVQDPRIL MAINGKVFDV TKGRKFYGPE GPYGVFAGRD ASRGLATFCL 120
  121 DKEALKDEYD DLSDLTPAQQ ETLSDWDSQF TFKYHHVGKL LKEGEXPTVY SDEEEPKDES 180
  181 TRKND

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.82
Transmembrane Helix	16	37	0.67
Cytoplasmic	38	185	0.61