YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54291559, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLGRIAIQL HASAPLLFSR RATATALVLP HSRRAAFAMA ATPPVARKVP RELAQHGDVR  60
   61 VDNYYWLRDD SRSHPDVLAH LRAENLYTAT IMSDVKNLED EIYAEIRARI KEDDIGAPLR 120
  121 KGQYYYYNRT LTGKEYVQHC RRLVPTDAPV TVYDVMPTGP NAPHEHIILD ENVKAEGHDY 180
  181 YSIGAFKVSP NGKLVAYAQD TKGDEIYTVY VIDAESGKFV GQPLEGITSD IEWAGDDHLV 240
  241 YITMDTILRP DKVWLHMLES NQSDDICLYH EKDDMFSLGL QTSESKQYLF VESGSKNTSF 300
  301 IFYLDISKQS KELVVLTPCV YGIDTTASHR GNHFYIKRRS EEFYNSELIA CPLDNVAETT 360
  361 VLLPHRESVK IQSFQLFENH IAVYERQNGL PKVTAYRLPA TGEPIGQLQG GREIDFVDPA 420
  421 YDVEPEQSQF GSSVVRFHYS SMRTPPSVFD YDMDSGVSVL KKIDTVLGGF DASNYVTERK 480
  481 WAAASDGTQI PMTILYRKDR VNLDGSDPML LYGYGSYEIC IDPSFGRSRF SLVDRGFIYV 540
  541 IAHIRGGGEM GRKWYEDGKL LNKRNTFTDF IACAEHLIEN KYCSKEKLCI NGRSAGGLLM 600
  601 GAVLNMRPDL FKAAVAGVPF VDVLTTMLDP TIPLTTSEWE EWGDPRKEEY YYYMKSYSPV 660
  661 DNLKAQGYPN ILVTAGLNDP RVMYSEPAKY VAKLRELKTD DNLLLFKCEL GAGHFSKSGR 720
  721 FEKLREDAFT YAFILKALGM APKAAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle