YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26000765
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMLLTVVVFA FSGTYALLFV ARTLQGIGSS FSSVAGLGML ASVYTDNYER GRAMGIALGG  60
   61 LALGLLVGAP FGSVMYEFVG KSSPFLILAF LALLDGALQL CILWPSKVSP ESAMGTPLLT 120
  121 LLKDPYILVA AGSICLANMG VAILEPTLPI WMMQTMCSPE WQLGLAFLPA SVAYLIGTNL 180
  181 FGVLANKMGR WLCSLVGMVA VGISLLC

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.68
Transmembrane Helix	18	44	0.79
Cytoplasmic	45	53	0.80
Transmembrane Helix	54	74	0.93
Non-Cytoplasmic	75	84	0.74
Transmembrane Helix	85	105	0.95
Cytoplasmic	106	124	0.89
Transmembrane Helix	125	144	0.95
Non-Cytoplasmic	145	162	0.82
Transmembrane Helix	163	183	0.91
Cytoplasmic	184	190	0.68
Transmembrane Helix	191	206	0.57
Non-Cytoplasmic	207	207	0.56