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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|804941
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLFAIPL VVPFYSHSAE MKRADAAPTV SIFPPSSEQL TSGGASVVCF LNNFYPKDIN  60
   61 VKWKIDGSER QNGVLNSWTD QDSKDSTYSM SSTLTLTKDE YERHNSYTCE ATHKTSTSPI 120
  121 VKSFNRNECQ GGGSGGGSGG GSEGGGSEGG GSEGGGSEGG GSGGGSGSGD FDYEKMANAN 180
  181 KGAMTENADE NALQSDAKGK LDSVATDYGA AIDGFIGDVS GLANGNGATG DFAGSNSQMA 240
  241 QVGDGDNSPL MNNFRQYLPS LPQSVECRPF VFSAGKPYEF SIDCDKINLF RGVFAFLLYV 300
  301 ATFMYVFSTF ANILRNKES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle