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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|469211
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARVCACLW MMLLIAQAEA TLENLVVLNA ASVAGAHGLL SFLVFFCAAW YIKGRLVPGA  60
   61 AYALYGVWPL LLLLLALPPR AYAMDREMAA SCGGAVFVGL VLLTLSPYYK VFLARLIWWL 120
  121 QYFITRAEAH LQVWVPPLNV RGGRDAIILL TCAVHPELIF DITKLLLAIL GPLMVLQAGM 180
  181 TRVPYFVRAQ GLIRACMLVR KVAGGHYVQM AFMKLAALTG TYVYDHLTPL RDWAHAGLRD 240
  241 LAVAVEPVVF SDMETKIITW GADTAACGDI ISGLPVSARR GKEILLGPAD SFGGMQAFIE 300
  301 GRGMISLIAA LAVDRVIGME NAMPWNLPAD LAWFKRNTLN KPVIMGRHTW ESIGRPLPGR 360
  361 KNIILSSQPG TDDRVTWVKS VDEAIAACGD VPEIMVIGGG RVYEQFLPKA QKLYLTHIDA 420
  421 EVEGDTHFPD YEPDDWESVF SEFHDADAQN SHSYCFEILE RSVDMEGRGT SRSGDDIVCC 480
  481 SMSYVDMEGR GGSTMAHFPG FGQSLLFGYP VYVFGDCVQG DWCPISGGLC SARLHRHALL 540
  541 ATCPEHQITW DPIDGRVIGS ALQFLIPRLP SFPTQRTSKT LKVLTPPITH TTPNIPPSFL 600
  601 QAMRKYSPFR NGYMEPTLGQ HLPTLSFPDP GLRPQNLYTL WGGSVVCMYL YQLSPPITWP 660
  661 LLPHVIFCHP GQLGAFLTNV PYKRIEELLY KISLTTGALI ILPEDCLPTT LFQPARAPVT 720
  721 LTAWQNGLLP FHSTLTTPGL IWTFTDGTPM ISGPCPKDGQ PSLVLQSSSF IFHKFQTKAY 780
  781 HPSFLLSHGL IQYSSFHSLH LLFEEYTNIP ISLLFNEKEA DDNDHEPQIS PGGLEPPSEK 840
  841 HFRETEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle