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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54290856
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASVAAAHA AAASAGGRRA RREPASMHAG IRRSRSEPHL RCSRRGGAAG AALTTSRSIG  60
   61 VFPFQFGAAP LRTPPLPDGG GDGSRLLTVA GPDDEPDDAP GPEMPAARRR PDAHWLDRLL 120
  121 ELRSRFHDPT KRHSSDNNGL IFQDDDDDDD VYHLDGDDGC GVNYEDDDEQ VDDRWDRESF 180
  181 SKLLARAPLG EARLFAQLAF LCNMAYVIPE IKVEELKKYY GLRFVTSSLE KKAEAGEIRS 240
  241 KLDVDSTRPR AAPACEAAAA TTSGPQPRRP IRSHLAYEVA ASAASYVHAR ARGLLSFGGA 300
  301 GGQQPRAEEG GHGRLYNSGV AAYVAASTVT AVVAAEDEAR QEAARDLRSP LSSPCEWFVC 360
  361 DEADARTRCF VIQGSDSLAS WQANLLFEPT MFEETGVLVH RGIYEAAKGI YEQLMPEIAA 420
  421 HLAAHGERAR LRLTGHSLGG SLALLVSLML VARGVVGPEA LLPVVTFGAP SVFCGGQRVL 480
  481 DALGVGEGHV RSVAMHRDIV PRAFSCRYPG HAVALLKRLN GVLRNHPCLN NQRMLYTPMG 540
  541 TTYILQPDGA ASPPHPFLPE GAALFRLDPE GRAERPARHV VASALRAFLN SPHPLETLSD 600
  601 LSAYGSEGAI LRDHESSNYF RALNALTRVP RRRKQPEIVW QLPGVERLQQ YWWPGIAGTV 660
  661 FPAAPPVSVR NKELVSEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle