YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17066524
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVFCWVFL VVILKGVQGE VQLVESGGDL VKPGGSLRLS CVASGFTFSS YYMHWIRQAP  60
   61 GKGLQRVAHI RGDGRTTHYA DAMKGRFTIS RDNAKNTLYL QMNSLTVEDT AIYYCVKDIY 120
  121 YGVGDYWGQG TLVTVSSAST TAPSVFPLAP SCGSTSGSTV ALACLVSGYF PEPVTVSWNS 180
  181 GSLTSGVHTF PSVLQSSGLH SLSSMVTVPS SRWPSETFTC NVVHPASNTK VDKPVFNECR 240
  241 CTDTPPCPVP EPLGGPSVLI FPPKPKDILR ITRTPEVTCV VLDLGREDPE VQISWFVDGK 300
  301 EVHTAKTQSR EQQFNGTYRV VSVLPIEHQD WLTGKEFKCR VNHIDLPSPI ERTISKARGR 360
  361 AHKPSVYVLP PSPKELSSSD TVSITCLIKD FYPPDIDVEW QSNGQQEPER KHRMTPPQLD 420
  421 EDGSYFLYSK LSVDKSRWQQ GDPFTCAVMH ETLQNHYTDL SLSHSPGK

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	468	0.99