YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25989211
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTPFEKIRI ISCILVIVST NVVGQKCNGG ANCIPLEECT DLFQQLKQGN SPQLTRLLRG  60
   61 LHCGFEDLNS PKICCPPEFL ARRSAFSSAG TNSNPTSILP NEKVCGIQNN DRIFGGIQTE 120
  121 IDEHPWMALL RYDKPLGWGF YCGGVLIAPM YVLTAAHCVK GSDLPSSWQL SQVRLGEWNT 180
  181 STETDCVEGD CSGPVQDIPV QQIIAHENYD PNDKDQQNDI ALLRLSRNAQ FNDFVSPICL 240
  241 PTSNELRQNE FESDYMEVAG WGKTETRSES DVKLKVRVPI VNREECANVY SNVDRRVTNK 300
  301 QICAGGLAGR DSCRGDSGGA LMGQSPKANN WYVFGVVSYG PSPCGTEGWP GVYTRVGSFM 360
  361 DWILSNSNSN DDIYLSTLVL TNCEFR

Type	Start	End	Confidence
Signal Peptide	1	24	0.87
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	386	0.95