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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18152946
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATPTSSVATT TASTPESSSI SSNFVSTDYM EPQPEENSPP IIKTRLQKLA VTSGKAFTFH  60
   61 VLPETFYDAE DQGNLRLALT DKDGHELKAN SWLQFNADKR ELYGLPLDDT VSRWQYRLSA 120
  121 TDSGNASVTE TVEISVQQHR AVRTINHEIS VFVRINEKPG HNIDWQLKLI NAVARTLDDS 180
  181 TNSAVVVREI RQTPHDPHSA TFVYFNETLP TSECPEKELK DIIARLDANR LSDLVQPQLG 240
  241 IKSITGQLIG SCQKDLTQVK PTQHMTKNVP PMPRNQVDRV NASLGQLLVY KVPADTFYDA 300
  301 NDNQLTLTLK TRDHLELSPR HWLQFDSKNE EFYGIPKSGD IGSEEYLLVA EDSGGLSAHD 360
  361 ALVVVVSPAP KRDFGFFFKA YLSIKHERFN ADLQRKFVER VAKLNGDPTT GQIQIRSITT 420
  421 HHDSDGTIVN FYNTTLYRKH NSCREKEVAM TRSVYLNSDL SLREAAKRAL GPELNLTNFS 480
  481 VVPFSICHHT ENIDTNQLDY IPSRPEEPTH KSSFGEDYMI TFVWPIVIIV AMLVAASIIA 540
  541 CCLHWCRQRS GKMELGDEEE RKSFRAKGIP VIFQDEYEEK PEIGNKSPVI LKDEKPPLLP 600
  601 PSYNTSNMNG DNDVDDYVPP PSVVVGGREV RGKSPATPSY RKPPPYVSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle