YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18140056
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVMVSGTVA VLLMAALATT YAAQFPAGYT LCPKDDQKCL FERIGATFAK HAAGIPAIDL  60
   61 VSLDPLKIQK MDIVQGGDGP INIVLNFKNV DLTGLSEAVV KKANGFTGNP TKMELGILVP 120
  121 VTSLVGGYKI NGKVLILPIQ GEGRSNMTME NNHIQMKWTG KLVDRNGKQY YQLDKLKATF 180
  181 DTTRFHMHFS NLFNGDKALG DNMNVFLNEN WQDILKELKP AIIDAFVKIF QSVISSVFNK 240
  241 VPYNELFQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	248	0.99