YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53791873
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSSSTSLV SLLLPCLLSL LLIRLSTHLN PDPTAAAPRF KRTPPFPLRF RHDGAFKILQ  60
   61 VADMHFGNGA ATRCRDVAPE VGGARCSDLN TTRFLRRVIE AERPDLIAFT EGLGGISRQI 120
  121 TCCLPMFAIV EKYLRQSTRD NIFGGSASDA AESLLKAISP AIEYKVPWAA ILGNHDQEST 180
  181 MTREELMVFM SLMDYSVSQV NPPGSLVHGF GNYHVSIHGP FGSEFVNTSL LNLYFLDSGD 240
  241 REVVNGVKTY GWIKESQLAW LRATSQELQQ NLHAPAFAFF HIPIPEVRGL WYTGFKGQYQ 300
  301 EGVACSTVNS GVLGTLTSMG DVKAVFLGHD HLNDFCGDLN GIWFCYGGGF GYHAYGRPHW 360
  361 PRRARVIHTE LKKGQKSLVE VESIHTWKLL DDEKLTKIDE QVLWRHSSI

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	409	0.98