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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215768699, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSAGTISQQ LTRYAAAQAL LPGAHLHASL LKSGSLASFR NHLISFYSKC RRPCCARRVF  60
   61 DEIPDPCHVS WSSLVTAYSN NGLPRSAIQA FHGMRAEGVC CNEFALPVVL KCVPDARLGA 120
  121 QVHAMAMATG FGSDVFVANA LVAMYGGFGF MDDARRVFNE ADSERNAVSW NGLMSAYVKN 180
  181 DQCGDAIQVF GEMVWSGIQP TEFGFSCVVN ACTGSRNIEA GRQVHAMVVR MGYDKDVFTA 240
  241 NALVDMYMKM GRVDIASVIF EKMPDSDVVS WNALISGCVL NGHDHRAIEL LLQMKYSGLV 300
  301 PNVFTLSSIL KACSGAGAFD LGRQIHGFMI KANADSDDYI GVGLVDMYAK NHFLDDARKV 360
  361 FDWMFHRDLI LCNALISGCS HGGRHDEALS LFYELRKEGL GVNRTTLAAV LKSTASLEAA 420
  421 STTRQVHALA VKIGFIFDAH VVNGLIDSYW KCSCLSDANR VFEECSSGDI IACTSMITAL 480
  481 SQCDHGEGAI KLFMEMLRKG LEPDPFVLSS LLNACASLSA YEQGKQVHAH LIKRQFMSDA 540
  541 FAGNALVYTY AKCGSIEDAE LAFSSLPERG VVSWSAMIGG LAQHGHGKRA LELFGRMVDE 600
  601 GINPNHITMT SVLCACNHAG LVDEAKRYFN SMKEMFGIDR TEEHYSCMID LLGRAGKLDD 660
  661 AMELVNSMPF QANASIWGAL LGASRVHKDP ELGKLAAEKL FILEPEKSGT HVLLANTYAS 720
  721 AGMWNEVAKV RKLMKDSNIK KEPAMSWIEV KDKVHTFIVG DKSHPMTKEI YAKLVELGDL 780
  781 MSKAGFVPNV DVDLHDLDRS EKELLLSHHS ERLAVAFALL STPPGAPIRV KKNLRICRDC 840
  841 HVAFKFISKI VSREIIIRDI NRFHHFRDGT CSCGDYW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle