YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TNFL6_FELCA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQPLNYPYP QIYWVDSRAS SPWGPPGSVL PCPSSVPGRP GQRRPPPPPP PTLPPPPPPP  60
   61 PLPPLPLPPL KTRRDHNTGL CLLVMFFMVL VALVGLGLGM FQLFHLQKEL AELRESTSQK 120
  121 HVASSLEKQI GQLNPPSEKR ELRKVAHLTG KPNSRSIPLE WEDTYGIALV SGVKYKKGGL 180
  181 VINDTGMYFV YSKVNFRGQS CNNQPLNHKV YMRNSKYPQD LVLMEGKMMN YCTTGQMWAR 240
  241 SSYLGAVFNL TSADHLYVNV SELSLVSFEE SKTFFGLYKL

Type	Start	End	Confidence
Cytoplasmic	1	79	0.97
Transmembrane Helix	80	101	0.94
Non-Cytoplasmic	102	280	0.98