YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7007423
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREVRKEVRP IDPVVVITIL GGAIVVLLIV GAPIKPLRML GQIGIKFVIG GLLLFFVNVF  60
   61 GALIDLHVPI NFITAAVSGF LGIPGLALLV AIQQLVLS

Type	Start	End	Confidence
Cytoplasmic	1	13	0.75
Transmembrane Helix	14	34	0.94
Non-Cytoplasmic	35	42	0.70
Transmembrane Helix	43	64	0.91
Cytoplasmic	65	71	0.66
Transmembrane Helix	72	92	0.94
Non-Cytoplasmic	93	98	0.63