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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49614228
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPISMELPVF STLRVPLFSR LALLPTFGVP FSSLGATTRL NCTSRKARRI CVMCLVRDSA  60
   61 PIETCERAGE DGSDEFIEVL VIGSRKESIM DSCLDSPFPS LPLRFWSISK DSSGGLVLQQ 120
  121 RLNHQDNASK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK 180
  181 PFSFEGRKRL EEVNELARKL QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA 240
  241 ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP 300
  301 FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV 360
  361 TTFFILSSSE EETSNKGNIF SGLVPFVLNI FTRYRSQLQK ETNIGLGETP VSIKDSADST 420
  421 DIKTSNQNVE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE 480
  481 PIANWSMDQG YQIEQKWQAD SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS 540
  541 REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM 600
  601 QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED 660
  661 LIHGKGWFYL HKGDRWFANF WKGKASGEGR FYSKSGEIFF GHFKDGWRHG QFLCIDLDGT 720
  721 RYSETWDDGV LIDRKQVDAG D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle