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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22003996
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPRWFFLAF VALLSFTNVV DARRPLRKVS LTSPSAPSGG NTGKKIVCYF TNWAQYRQGD  60
   61 GKFLPEDIDP TLCTHIIYAF GWMKKHKLSS FDAADDTKNG KKGLYERVID LKKKNPSLKV 120
  121 LLAVGGWSFG TQRFKEMASN SYNRRLFIFS ALNFLRRRKF DGLDLDWEFP RGNEDKKNFV 180
  181 ELVRELREAF EAEAKEKKLP RLLLTAAVSA GAETIRGGYD VPAVAAYVDF LNVMSYDFHG 240
  241 KWESMTGHNS PLYAQANETT WRKQLCMDFG VKTWERLGAP KEKIVVGTGT YGRTFTLANP 300
  301 NNNGMNAPSS GGGDAGQFTK EAGFLAYYEI CDMLKKGADY VWDEEQLVPY AYLGNQWVGF 360
  361 DDERSIRAKM QWIKMNGYAG AMVWTVDMDD FRGRCTTKTW PLIGAMAEEL LNRPSRGPKN 420
  421 LLPFVKKQRT SSAKSTGTTE PPNSIKGSDP LKAAPSNLPV KDEAPESDTN ARVVCYFTNW 480
  481 SAKRKGKGHY EPEDIDATLC THVIYAFANI KEFKIVPTEP VDEGDGSAKK GFWERIVALK 540
  541 TKNPQLKVML AVGGWMLGSA PFREVTENSY RQSLFVFNAI DFLREKGFDG LDVDWEFPRG 600
  601 AEDKKKLAGL IKELRVAFDG EGLASKKPRL ILSMAAPASF EAISAGYDVE ELNKHVDMIN 660
  661 MMTYDFHGDW ERQVGHHSPL FPLYTASSFQ KKLTVDYSAG EWVRKGASKE KLLVGIPTYG 720
  721 RTFTLGDNNL TDVGAPATAG GRPGNYTGET GFLSFFEICD LLRSGATLVW DNEQMVPYAY 780
  781 KDDQWVGFDD QRSLKLKVQW LKQAGYGGVM VWSVDLDDFK GTCTGHSYPL LTAIKEELKG 840
  841 YKVANLEVAS SNILNSYGQL VDPNEVVCDE EDGHISYHLD KKDCTMYYMC EGKRRHHMPC 900
  901 PTNLVFNLNE SVCDWPENVD DCKHIAAKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle