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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26006275
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WPCPGEPKPA PLTRRPPASR MRLWKAVVVT LAFVSTDVGV TTAIYAFSHL DRSLLEDIRH  60
   61 FNIFDSVLDL WAACLYRSCL LLGATIGVAK NSALGPRRLR ASWLVITLVC LFVGIYAMAK 120
  121 LLLFSEVRRP IRDPWFWALF VWTYISLAAS FLLWGLLATV RPDAEALEPG NEGFHGEGGA 180
  181 PAEQASGATL QKLLSYTKPD VAFLVAASFF LIVAALGETF LPYYTGRAID SIVIQKSMDQ 240
  241 FTTAVVVVCL LAIGSSLAAG IRGGIFTLVF ARLNIRLRNC LFRSLVSQET SFFDENRTGD 300
  301 LISRLTSDTT MVSDLVSQNI NIFLRNTVKV TGVVVFMFSL SWQLSLVTFM GFPIIMMVSN 360
  361 IYGKYYKRLS KEVQSALARA STTAEETISA MKTVRSFANE EEEAEVFLRK LQQVYKLNRK 420
  421 EAAAYMSYVW GSGLTLLVVQ VSILYYGGHL VISGQMSSGN LIAFIIYEFV LGDCMESVGS 480
  481 VYSGLMQGVG AAEKVFEFID RQPTMVHDGS LAPDHLEGRV DFENVTFTYR TRPHTQVLQN 540
  541 VSFSLSPGKV TALVGPSGSG KSSCVNILEN FYPLQGGRVL LDGKPIGAYD HKYLHRVISL 600
  601 VSQEPVLFAR SITDNISYGL PTVPFEMVVE AAQKANAHGF IMELQDGYST ETGEKGAQLS 660
  661 GGQKQRVAMA RALVRNPPVL ILDEATSALD AESEYLIQQA IHGNLQRHTV LIIAHRLSTV 720
  721 ERAHLIVVLD KGRVVQQGTH QQLLAQGGLY AKLVQRQMLG LEHPLDYTAS HKEPPSNTEH 780
  781 KA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle