YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115478362, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAASRLLAR ASRQCVAAVA ASAARRRRCP AAALSLPVVT AAKAAAAEPW LGVPYMLNQP  60
   61 LRYSTTIFQR FGFSSTSPEL SDKEENQRKD QENSTNVSNE GTEDVDLSKE DLVQLVLEKD 120
  121 GLLKSKDEEI NDMKDKVLRS YAEMENVIAR TKRESENSKK YAVQNFSKSL LDVADNLTRA 180
  181 SSVVKESFSK IDTSKDSTGA VPLLKTLLEG VDMTDKQLGE VFKKFGVEKF DPLNEKFDPS 240
  241 RHCAIFQIPD PSKPSGTVAS VVKVGYMLHD RVLRPAEVGV TEGGPTTTEE AAENSEQKSS 300
  301 EV

Type	Start	End	Confidence
Signal Peptide	1	46	0.95
N-region	1	37
H-region	38	43
C-region	44	46
Cleavage Site	46	47
Non-Cytoplasmic	47	302	0.99