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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215713560, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAVARGRRC RGVVLLLLLS SVLAPLVLYG GSPVSVSTLP DSTVASGVLD RDGEYNLVVA  60
   61 ASDVSLTKDL TIERLGEHKN RVLSATEDWQ VVEAASKNPA FEKSDASVSR KDPGSGDANV 120
  121 VITEGNGAAQ SGRDGVIWEV VSRDRGSDGF TQPWEINGGE ERDGERVDRV KLGVSVEEQN 180
  181 DGTGETGVNN IAGTHTSGNL NSSLEKERST GRLSEQVTKA IPKESYTPTT NSNSALPTSV 240
  241 SAGHSTTSPD ATIRTIKDQL TRATTYLSLV ASRGNHGFAR ELRARMRDIQ RVLGDATSGG 300
  301 QLPQNVLSKI RAMEQTLGKG KRILDSCSGA LNRLRATLHS TEERLQSHKK ETNYLAQVAA 360
  361 KSLPKGLHCL PLRLTNEYYY TNSNNKKFPH IEKLEDPKLY HYALFSDNVL AAAVVVNSTI 420
  421 IHAKKPADHV FHIVTDRLNY AAMKMWFLAN PLGEAAIQVQ NIEEFTWLNS TYSPVMKQLE 480
  481 SQSMIDYYFK SGQARRDENP KFRNPKYLSM LNHLRFYLPE IFPKLSKVLF LDDDTVVQQD 540
  541 LSAIWSIDLK GKVNGAVETC GETFHRFDKY LNFSNPLIAS NFDPRACGWA YGMNVFDLSE 600
  601 WRRQKITDVY HNWQRLNENR ILWKLGTLPA GLVTFWNRTF PLHHSWHQLG LGYNPNINEK 660
  661 DIRRASVIHY NGNLKPWLEI GLSRYRKYWS KYVDFDQVFL RDCNINP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle