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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52076936, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSGGGGGGG ALRPSALDLV AALLTGRGRP EEEGWPPSLA ENRHLIVLLT TSLAVLVGCG  60
   61 VALLVRRSSI SAPAVRAQEP QPRAPAPAKR KQEAEPDPDD GRQRVAVFFG TQTGTAEGFA 120
  121 KALAEEAKSR YDKAVFKVLD LDEYAADDEE YEQKLKKEII ALFFVATYGD GEPTDNAARF 180
  181 YKWFGEGNER GEWLSNLRFG VFGLGNRQYE HFNKVGKVVD QLLAEQGGKR IVPLGLGDDD 240
  241 QCIEDDFNAW KELLWPELDK LLRVEDDKSA APTPYTAAIP EYRVVLVKPE EAMHINKSFS 300
  301 LSNGHAVYDI QHPCRANVAV RRELHTPASY RSCIHLEFDI SGTGLTYETG DHVGVYAENC 360
  361 TETVEEVENL LGYSPDTLFS IHADQEDGTP LFGGSLPPPF PSPCTVGTAL ARYADLLSFP 420
  421 KKSALIALAS HASDPKDAER LRHLASPAGK KEYSQWIVSS QRSLLEVMTE FPSAKPPLGV 480
  481 FFAAIAPRLQ PRYYSISSSP RMTPTRIHVT CALVYGQTPT GRIHKGVCST WMKNSIPLEE 540
  541 SQECSWAPIF VRQSNFKLPT DPTVPIIMIG PGTGLAPFRG FLQERLALKE TGVELGHAVL 600
  601 FFGCRNRKMD FIYEDELNNF VETGALSELI VAFSREGPSK EYVQHKMAEK APEIWSIISQ 660
  661 GGYIYVCGDA KGMARDVHRT LHTIVQEQGS LDNSNTESYV KSLQMEGRYL RDVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle