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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPS1_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWRWALARR VAALGATSGG GDGATAQAQR LFSSAAALLG RHPPPPSPPH YQIRSKVVGC  60
   61 RGATFVSSRW LHDAQYQVRQ DGLSRSEEQQ DPFELVADEL SLLANRLRSM VAAEVPKLAS 120
  121 AAEYFFKVGA EGKRFRPTVL LLMASALKFP LSDSTEVGVL TILANKLRTR QQNIAEITEM 180
  181 IHVASLLHDD VLDDADTRRG VSSLNCIMGN KLSVLAGDFL LSRACVALAA LGNTEVVSLM 240
  241 ATAVEHLVTG ETMQISTSRE QRRSMDYYLQ KTYYKTASLI SNSCKAVAIL AGHTADVSML 300
  301 AYEYGRNLGL AFQLIDDVLD FTGTSASLGK GSLTDIRHGI ITAPMLYAME EFPQLHEVVD 360
  361 RGFDNPANVE LALDYLQKSR GIEKTKELAR EHANRAIKAI EALPDSDDED VLTSRRALID 420
  421 ITERVITRTK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle