YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113595759, gi...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPASSSSA AGLQERIWDL HDNLSHAILS LSASAHRCCR RRAPEGRVVV KGWRRQGGCG  60
   61 DCGLEQEAAA AATMADARSL HAVRAALEDL EGHLHFLHNI QLCQVAERDA AIARLQQSRI 120
  121 LLATRLAEHR WKKHEVIEEA LAFVDDALDK SRFVSPEDVR GTHTHSQSVE NQCPKIHDSN 180
  181 FLVRFLSCTL AIAKNSLRFE RIGGALGNTA MFAVSMLAFL QLQQVAFGKQ TPAVQCRRVN 240
  241 YFHSQMSVKN TKEKHLVVLL ARG

Type	Start	End	Confidence
Cytoplasmic	1	201	0.59
Transmembrane Helix	202	220	0.65
Non-Cytoplasmic	221	263	0.88