YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51971807
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRLSAVIGSR RSFPIVGAFC VLSTLSISSL SSSSPFKSGC AQSFSVVPLL RSKFSSKAFS  60
   61 SSIRMEESSK TVPSIVVYVT VPNREAGKKL ANSIVQEKLA ACVNIVPGIE SVYEWEGKVQ 120
  121 SDSEELLIIK TRQSLLEPLT EHVNANHEYD VPEVIALPIT GGSDKYLEWL KNSTRN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.80
Transmembrane Helix	12	30	0.86
Non-Cytoplasmic	31	176	0.94