YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUD15_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLYRRLPS FARTTTTTLL CKSMEPAITA TSSSSFGGGS SRLAALAQQL RQYKPPPSSS  60
   61 FDDSEEMQTD QETAGKVVSQ VGFQESIAPL SKDPDRFKPK RAAVLICLFE GDDGDLRVIL 120
  121 TKRSSKLSTH SGEVSLPGGK AEEDDKDDGM TATREAEEEI GLDPSLVDVV TSLEPFLSKH 180
  181 LLRVIPVIGI LRDKNKFNPI PNPGEVEAVF DAPLEMFLKD ENRRSEEREW MGEKYLIHYF 240
  241 DYRTGDKDYM IWGLTAGILI RAASVTYERP PAFIEQCPKF KYPKM

Type	Start	End	Confidence
Signal Peptide	1	47	0.67
N-region	1	38
H-region	39	44
C-region	45	47
Cleavage Site	47	48
Non-Cytoplasmic	48	285	0.99