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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110743620, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLISHRQC VTSPFLISAA SPPFPGRCFK LSSFTPPRHR RFSSLSIRNI SHESADQTSS  60
   61 SRPRTLYPGG YKRPELAVPG LLLRLDADEV MSGNREETLD LVDRALAKSV QIVVIDGGAT 120
  121 AGKLYEAACL LKSLVKGRAY LLIAERVDIA SAVGASGVAL SDEGLPAIVA RNTLMGSNPD 180
  181 SVLLPLVARI VKDVDSALIA SSSEGADFLI LGSGEEDTQV ADSLLKSVKI PIYVTCRGNE 240
  241 EAKEELQLLK SGVSGFVISL KDLRSSRDVA LRQSLDGAYV VNNHETQNMN ELPEKKNSAG 300
  301 FIKLEDKQKL IVEMEKSVLR ETIEIIHKAA PLMEEVSLLI DAVSRIDEPF LMVIVGEFNS 360
  361 GKSTVINALL GKRYLKEGVV PTTNEITFLC YSDLESEEQQ RCQTHPDGQY VCYLPAPILK 420
  421 DINIVDTPGT NVILQRQQRL TEEFVPRADL LVFVLSADRP LTESEVAFLR YTQQWKKKFV 480
  481 FILNKSDIYR DARELEEAIS FVKENTRKLL NTENVILYPV SARSALEAKL STASLVGRDD 540
  541 LEIADPGSNW RVQSFNELEK FLYSFLDSST ATGMERIRLK LETPMAIAER LLSSVEALVR 600
  601 QDCLAAREDL ASADKIISRT KEYALKMEYE SISWRRQALS LIDNARLQVV DLIGTTLRLS 660
  661 SLDLAISYVF KGEKSASVAA TSKVQGEILA PALTNAKVSV MLYSLSIGLT GDMLVIYMRN 720
  721 CLENMLNGYN QILPVKGVCL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle