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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAGT2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFMSLVRT ATIALLLIAF LQNANAVKNL QSIVAYHGAV ATDDGRCSAI GTNVLRQGGN  60
   61 AIDASVAAAL CLGVVSPASS GIGGGAFTMI KLANGTEVAY DSRETAPLSA TEDMYGDNPE 120
  121 RKKKGSLSVG VPGEVAGLYT AWTQHGKLPW KQLVEPAEKL AAEGFKISKY LYMQMNATRS 180
  181 DILADKGLSE LFVSNGELKK PGAICRNPKL ADTLSQIAEY GPKAFYNGTV GFNLVSDIQK 240
  241 AGGIITLKDL QNYNVKVKEP LSTEILGYRL LGMPPPSSGG PAMMLILNIL AQYGIPSGVS 300
  301 GPLGVHRLVE ALKHAFAVRM NLGDPDFVPE VTNVVADMLS PKFAQDLKSK INDEKTFDPK 360
  361 YYGGKWGQIK DHGTSHLSII DSERNAVSMT STINGYFGAI MLSPSTGIVL NNEMDDFSIP 420
  421 TKSGGDPDVP PPAPANFIRP GKRPLSSMTP TIVLKDGKVK AALGASGGMY IIAGTTQVYL 480
  481 NHFFLNMDPL SSVVAPRIYH QLIPNKASYE NWTTVYSDHF EIPEEIRLVL EKKGQVLTPI 540
  541 AGGTISQLIV EQSDGKSGGI SKLVAVSDPR KGGFPSGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle