YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51969740
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKHTHQKYQ ISQTMSSVFG SVHILAMIAI QLLLTHSVSS LNLTNAYLHH KCSNTQGKYK  60
   61 QGSAFEKNLN LVLSTITSIG NFRDGFRYTE EGEDPNNVFV MFQCRGDSYW SKCPPCISTA 120
  121 VSGLRRRCPR NKGAIIWYDQ CLLKISSVAS FNKIDYENDF YLSNPNNMSD RGLFNKETSA 180
  181 LLEKLAYKAS DRNNLDGKQL VLYAAGEKRI GTKKVYAMVQ CTKDLIFTKC FECLEGILRK 240
  241 FPQCCDGKRG GRVFGTSCNF RYELYPFLRN

Type	Start	End	Confidence
Cytoplasmic	1	13	0.80
Transmembrane Helix	14	34	0.81
Non-Cytoplasmic	35	270	0.98