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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UDB33_MACMU
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKWTSIIL LIQLSFYFSS GSCGKVLVWA AEYSHWMNMK TILEELVQRG HEVTVLASSA  60
   61 SILFDPNNSS ALKIEVFPTS LTKTEFENII RQQIKRWSEL PKDTFWLYFS QIQEIMWRFG 120
  121 DISIKFCKDV VSNKKLMKKL QESRFDVVLA DPIFPCSELL AELFNIPLVY SLRFTPGYVF 180
  181 EKHCGGFLFP PSYVPVVMSE LSDQMTFMER VKNMIYVLYF DFCFQLYDMK KWDQFYSEVL 240
  241 GRHTTLSEIM GKADIWLIRN SWNFQFPHPL LPNVDFIGGL LCKPAKPLPK EMEEFVQSSG 300
  301 ENGVVVFTLG SMITNMKEER ANVIASALAQ IPQKVLWRFD GNKPDTLGVN TRLYKWIPQN 360
  361 DLLGHPKTKA FITHGGANGI YEAIYHGVPM VGIPLFADQP DNIAHMKTRG AAVQLDFDTM 420
  421 SSTDLANALK TVINDPLYKE NVMKLSRIQR DQPVKPLDRA VFWIEFVMRH KGAKHLRPAA 480
  481 HDLTWFQYHS LDVIGFLLAC VATVIFIIMK CCLFCFWKFT RKGKKGKSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle