YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51968888
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGQTLIFTF LFVSLSLTFI IGRIKRRPNL PPSPSWALPV IGHLRLLKPP LHRVFLSVSE  60
   61 SLGDAPIISL RLGNRLVFVV SSHSLAEECF TKNDVVLANR FNSLASKHIS YGCTTVVTAS 120
  121 YGDHWRNLRR IGAVEIFSAH RLNSFSSIRR DEIHRLIACL SRNSSLEFTK VEMKSMFSNL 180
  181 TFNNIIRMLA GKCYYGDGAE DDPEAKRVRE LIAEGMGCFG AGNTADYLPI LTWITGSEKR 240
  241 IKKIASRLDE FLQGLVDERR EGKEKRQNTM VDHLLCLQET QPEYYTDNII KGIMLSLILA 300
  301 GTDTSAVTLE WTLSALLNHP QILSKARDEI DNKVGLNRLV EESDLSHLPY LQNIVSESLR 360
  361 LYPASPLLVP HVASEDCKVG GYHMPRGTML LTNAWAIHRD PKIWDDPTSF KPERFEKEGE 420
  421 AQKLLGFGLG RRACPGSGLA QRLASLTIGS LIQCFEWERI GEEEVDMTEG GGGVIMPKAI 480
  481 PLVAMCKARP VVGKILNESA

Type	Start	End	Confidence
Cytoplasmic	1	5	0.39
Transmembrane Helix	6	23	0.58
Non-Cytoplasmic	24	500	0.89